BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016D10LP1|AL427010
(961 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1373 1861 0.0
3x_Contig2 211 3e-54
>3x_Contig1373
Length = 6197
Score = 1861 bits (937), Expect = 0.0
Identities = 956/961 (99%), Gaps = 2/961 (0%)
Strand = Plus / Plus
Query: 1 gatcatttagcaagttacttaacaacctttcccatccgatgaccaaaaactccatgattt 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gatcatttagcaagttactttacaacctttcccatccgatgaccaaaaactccatgattt 605
Query: 61 gtccttcaatagattccgaacgtcccgtactttggaagttagcatgtgattcattttgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gtccttcaatagattccgaacgtcccgtactttggaagttagcatgtgattcattttgta 665
Query: 121 tgctgtcagataaattgttttatgccttggtggccaatttgaccgcaaccgaagaggata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tgctgtcagataaattgttttatgccttggtggccaatttgaccgcaaccgaagaggata 725
Query: 181 atgttaacgaatataccgccatattgatacaaatgcttatcgcgactatagtgaaagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 atgttaacgaatataccgccatattgatacaaatgcttatcgcgactatagtgaaagaag 785
Query: 241 gaaagcaagatgatgaaaacatcggcatacaagctgttatcatatataagcagttgaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 gaaagcaagatgatgaaaacatcggcatacaagctgttatcatatataagcagttgaagg 845
Query: 301 aactgtttataaaatgtctttctttgggattgttgtcgaaagaacaaatacagccattcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 aactgtttataaaatgtctttctttgggattgttgtcgaaagaacaaatacagccattcg 905
Query: 361 gttctgctttatggtcaagttcatattattatgaaattgatgaggttgaggacgctgtta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 gttctgctttatggtcaagttcatattattatgaaattgatgaggttgaggacgctgtta 965
Query: 421 tcaaacaatgcgccaacttagaagatattgtcagacaatttgcaaagtttgattttgaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966 tcaaacaatgcgccaacttagaagatattgtcagacaatttgcaaagtttgattttgaca 1025
Query: 481 atatcgttggaagtaccaaagaacctgtggctctgcccaattatwatctcacggcaattt 540
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1026 atatcgttggaagtaccaaagaacctgtggctctgcccaattataatctcacggcaattt 1085
Query: 541 gtttgggagaccttatagcattttgtactttacaaaccaacaaaggtgaaattgtgagag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 gtttgggagaccttatagcattttgtactttacaaaccaacaaaggtgaaattgtgagag 1145
Query: 601 aagtatgtttttcgttcatgatcgcaagagtggcatttgtattaagaaagttcattgccg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1146 aagtatgtttttcgttcatgatcgcaagagtggcatttgtattaagaaagttcattgccg 1205
Query: 661 accagcagcttctcaatttacaacccatctccaaggtcaaaagtttagagctgcaacaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1206 accagcagcttctcaatttacaacccatctccaaggtcaaaagtttagagctgcaacaag 1265
Query: 721 tatccaatgggatcttgagtgtacttgcattttacaacacggtggatactaccatacaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1266 tatccaatgggatcttgagtgtacttgcattttacaacacggtggatactaccatacaga 1325
Query: 781 gcttcgaattgttggatgacctttatccgttattgttgagggctatccctctttctcaga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1326 gcttcgaattgttggatgacctttatccgttattgttgagggctatccctctttctcaga 1385
Query: 841 aagttccaggacttcaggacacgctattgcaaatagccctattatatgcaaaactaaatw 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1386 aagttccaggacttcaggacacgctattgcaaatagccctattatatgcaaaactaaata 1445
Query: 901 aatgagggttgttttgtaaacgtttgattatataactatagaataawttcattaagaggt 960
||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1446 aatga-ggttgttttgtaaacgtttgattatataactatagaataa-ttcattaagaggt 1503
Query: 961 t 961
|
Sbjct: 1504 t 1504
>3x_Contig2
Length = 877
Score = 211 bits (106), Expect = 3e-54
Identities = 124/128 (96%), Gaps = 2/128 (1%)
Strand = Plus / Plus
Query: 834 tctcagaaagttccaggacttcaggacacgctattgcaaatagccctattatatgcaaaa 893
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctcagtaagttccaggacttcaggacacgctattgcaaatagccctattatatgcaaaa 60
Query: 894 ctaaatwaatgagggttgttttgtaaacgtttgattatataactatagaataawttcatt 953
|||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 ctaaataaatga-ggttgttttgtaaacgtttgattatataactatagaataa-ttcatt 118
Query: 954 aagaggtt 961
||||||||
Sbjct: 119 aagaggtt 126
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7215
Number of Sequences: 1807
Number of extensions: 7215
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 2
length of query: 961
length of database: 10,358,551
effective HSP length: 16
effective length of query: 945
effective length of database: 10,329,639
effective search space: 9761508855
effective search space used: 9761508855
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)